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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015823853.1_cds_XP_016501653.1_15364
CDS Infomation

[gene=LOC107819972] [db_xref=GeneID:107819972] [protein=uncharacterized protein LOC107819972] [protein_id=XP_016501653.1] [location=complement(join(1047..1100,1192..1326,1417..1579,1666..1721,1805..1881,1979..2129,3432..3539,3652..3728,3918..3930,4020..4144,4228..4269,4369..4411,4522..4632,4717..4845,4985..5026,5153..5222,5324..5447,5670..5762,5849..5917,6008..6104,6810..6866,6940..6993))] [gbkey=CDS]
Sequence

ATGGTGAGCCCAGCAGAGATATCATCGTTTAATGCTTTTCTCATTTCAACTACGGTTACT
GTTCAGAAACTGAAGGAATCAGAAATTACAGAGCAGGACTCACTCCTCCTTACAAGGAAC
TTGATGCGCATTGCTTTATTCAACATTGCTTACGTCAGAGGCCTGTTTCCTGAGGAATAT
TTTAGTGATAAATCTGTTCCAGCTTTAGAGATGAAAATTAAGAAACTCATGCCCATGGAT
GCTGAATCACGTCGACTGATTGATTGGATGGAAAAAGGTGTTTATGATGCATTTCAGAAG
AAGTATCTTAAAACACTCTTGTTCAGCGTGTGCGAAAAAATAGGTGGCCCAATGATCGAG
GAATATGCATTTTCTTTCTGTTACTCAAACTCTGACAGCCAAGAAGTGTCAATGAATGTC
AATCGCATTGGAATGAAGAAAGGGGGAACATTCAAGTGCAATTCAACCGCTGAAATAACT
CCCAATCAGATGAGGAGTTCTGCTTGTAAAATGGTCCGTACATTGATTCAGTTGATGAGA
ACTTTGGATAAGATGCCAGAAGAGCGAACGATACTGATGAAGCTCCTTTATTATGATGAT
GTCACTCCTGCTGATTACGAGCCTCCTTTCTTTAGAAGCTGCACTGAAGAGGAGGCTGTT
AATCCATGGACTAAAAGTCCTTTGGAAATGGAGGTTGGCAATGTCAATAGCAAGCATTTT
GTGTTAGCTCTGAAGCTTAAGAGCATTCTTGATCCCTGTGAGGATGAGAATGACAACAAT
CAAGATATTAGTGTGAGCTTGGGAGCTGATTCCTTCCAGGGTGATGACAGCGAATCTGAT
AGTGAGTTCAGTCACTCTGATGATGACCAATACATAGTTGCCCCAATTGAGAAGCAAGAT
GCTCAGGATAATGGTAATATGGATGATGAAGATGATACTCAGGATCCAGATGAAGATGAG
CAACAATTTGCTAGGCTAAAGGACTGGATCAACTCATACCACCTTGACAAAATTGAAGTG
ACTGATGTTCTGTCTCATTTCCCTGACATATCAGTGGTCTTGGCTGAAGACATTATAGAA
AAGCTTGTTAAGGAAGGCATACTTTCACGTGCTGGCACAGACTGTTACATCATTAACAAG
CAAATGAAATTCAACTATGAGTTCGACATTGTGAAAGAAGAAATTAACGGCCAGAAATAC
CCAAAAGGCAACCAAACTCAGCATGGCAAGGGTGAAGAATACATGTACATGAAGGCTTTG
TATCATGCTCTTCCAATGAACTATGTAACTATTAGCAAACTTCAAAGTAAACTAGCAGGA
GAAGCAAATCAAACTACTGTGAAGAAGCTACTAAATAAAATGACACAAGATGGCTTTGTT
GAGGCTAGCAGCAACCGCAGGCTAGGCAAGCGTGTGATCCACTCTGACTTGACTGAGAAA
AAACTGGTTGAGGTTAAGAAGGTCTTAGAGAAAGATGCCATGGATGTGGACATGAATAAA
TCAGGTAATAAGTCCAACAATTTAGAACTTCGGGTAGTAGATTTATCCACTTGTGGTGCT
CTCCGCTCTATTGGATCATACCTCACACGCACAAGAGGCAAATCTGATGCATACCAGAAT
GGCTCTGTCTTGAGCGATCAGACGGTCTCAAAGAGAAGAGACCACGGAAACAGTGGAAAC
ACCCCTTCAAGCAAGGCAGAGCCCATACCTACAGGGGAGAGTTTCGTACCTGGGAATGAG
AATGCGAAAACATATAGAAGCACAAATCGTGATGAGTTAGAGACAGTTGTCTGTAGCTTA
TCCAGTCAGGGTAAGCGTAAAAGGAAAGCAAGCATGGTAAAAGATCCTATTCCTCAGTAT
GTAAGACGCCAAAAATCTCAAATTGCTTGA

Peptide Sequence

PEP ID

XP_016501653.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107819972 [Nicotiana tabacum]
Sequence

MVSPAEISSFNAFLISTTVTVQKLKESEITEQDSLLLTRNLMRIALFNIAYVRGLFPEEY
FSDKSVPALEMKIKKLMPMDAESRRLIDWMEKGVYDAFQKKYLKTLLFSVCEKIGGPMIE
EYAFSFCYSNSDSQEVSMNVNRIGMKKGGTFKCNSTAEITPNQMRSSACKMVRTLIQLMR
TLDKMPEERTILMKLLYYDDVTPADYEPPFFRSCTEEEAVNPWTKSPLEMEVGNVNSKHF
VLALKLKSILDPCEDENDNNQDISVSLGADSFQGDDSESDSEFSHSDDDQYIVAPIEKQD
AQDNGNMDDEDDTQDPDEDEQQFARLKDWINSYHLDKIEVTDVLSHFPDISVVLAEDIIE
KLVKEGILSRAGTDCYIINKQMKFNYEFDIVKEEINGQKYPKGNQTQHGKGEEYMYMKAL
YHALPMNYVTISKLQSKLAGEANQTTVKKLLNKMTQDGFVEASSNRRLGKRVIHSDLTEK
KLVEVKKVLEKDAMDVDMNKSGNKSNNLELRVVDLSTCGALRSIGSYLTRTRGKSDAYQN
GSVLSDQTVSKRRDHGNSGNTPSSKAEPIPTGESFVPGNENAKTYRSTNRDELETVVCSL
SSQGKRKRKASMVKDPIPQYVRRQKSQIA

Transcript Sequence

Gene sequence data has not been registered.